Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| imidazolonepropionase | CKY39_RS01050 | Not Available | Positive | 222895 - 224097 | 41830.4 |
| formimidoylglutamate deiminase | CKY39_RS01055 | Not Available | Positive | 224094 - 225476 | 49473.2 |
| n-formylglutamate deformylase | CKY39_RS01060 | Not Available | Positive | 225483 - 226304 | 29763.1 |
| histidinol-phosphate transaminase | CKY39_RS01065 | Not Available | Positive | 226301 - 227458 | 40589.9 |
| homocysteine s-methyltransferase family protein | CKY39_RS01070 | Not Available | Positive | 227515 - 228564 | 37465.5 |
| sh3 domain-containing protein | CKY39_RS01075 | Not Available | Positive | 228643 - 229401 | 26254.3 |
| lysr family transcriptional regulator | CKY39_RS01080 | Not Available | Negative | 229408 - 230328 | 32747.4 |
| pace efflux transporter | CKY39_RS01085 | Not Available | Positive | 230430 - 230867 | 15701.5 |
| lipase secretion chaperone | CKY39_RS01090 | Not Available | Negative | 230889 - 231584 | 26005.8 |
| esterase/lipase family protein | CKY39_RS01095 | Not Available | Negative | 231811 - 232866 | 36667.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
