Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | CKY39_RS01000 | Not Available | Positive | 213227 - 214063 | 29694.3 |
| abc transporter atp-binding protein | CKY39_RS01005 | Not Available | Positive | 214048 - 214842 | 29389.5 |
| histidine utilization repressor | CKY39_RS01010 | Not Available | Positive | 214849 - 215586 | 27594.0 |
| histidine ammonia-lyase | CKY39_RS01015 | Not Available | Positive | 215657 - 217219 | 53638.8 |
| urocanate hydratase | CKY39_RS01020 | Not Available | Positive | 217257 - 218987 | 62688.7 |
| phytanoyl-coa dioxygenase family protein | CKY39_RS01025 | Not Available | Positive | 219059 - 219898 | 31533.6 |
| iclr family transcriptional regulator | CKY39_RS01030 | Not Available | Positive | 220032 - 220766 | 25980.2 |
| transporter substrate-binding domain-containing protein | CKY39_RS01035 | Not Available | Positive | 220825 - 221577 | 27343.1 |
| amino acid abc transporter permease | CKY39_RS01040 | Not Available | Positive | 221585 - 222253 | 24219.6 |
| hutd family protein | CKY39_RS01045 | Not Available | Positive | 222250 - 222822 | 20303.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
