Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine ammonia-lyase | CKY39_RS00950 | Not Available | Negative | 198453 - 199652 | 41986.1 |
| atp-binding protein | CKY39_RS00955 | Not Available | Positive | 199769 - 202093 | 85700.4 |
| s41 family peptidase | CKY39_RS00960 | Not Available | Positive | 202172 - 203797 | 55904.8 |
| nucleoside hydrolase | CKY39_RS00965 | Not Available | Positive | 203989 - 205170 | 42101.4 |
| xylulokinase | CKY39_RS00970 | Not Available | Positive | 205244 - 206716 | 51386.9 |
| tripartite tricarboxylate transporter substrate binding protein buge | CKY39_RS00975 | Not Available | Negative | 206733 - 207683 | 33242.1 |
| alpha-hydroxy acid oxidase | CKY39_RS00980 | Not Available | Negative | 207755 - 208987 | 43908.9 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS00985 | Not Available | Positive | 209109 - 210010 | 31459.9 |
| dna helicase recq | CKY39_RS00990 | Not Available | Negative | 210021 - 211931 | 69427.7 |
| abc transporter substrate-binding protein | CKY39_RS00995 | Not Available | Positive | 212236 - 213204 | 33794.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
