Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS00915 | Not Available | Positive | 188896 - 189438 | 19896.1 |
| hypothetical protein | CKY39_RS33040 | Not Available | Negative | 189735 - 190265 | 20234.4 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 190363 - 191897 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 191987 - 192063 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 192094 - 192169 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 192491 - 195364 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 195493 - 195605 | Not Available |
| hypothetical protein | CKY39_RS33045 | Not Available | Negative | 195736 - 195936 | 7203.62 |
| phosphoenolpyruvate carboxykinase (gtp) | CKY39_RS00945 | Not Available | Negative | 196177 - 198030 | 67745.9 |
| hypothetical protein | CKY39_RS33650 | Not Available | Negative | 198182 - 198331 | 5035.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
