Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter permease | CKY39_RS00870 | Not Available | Negative | 179308 - 180270 | 34045.8 |
| branched-chain amino acid abc transporter permease | CKY39_RS00875 | Not Available | Negative | 180267 - 181127 | 30075.2 |
| abc transporter substrate-binding protein | CKY39_RS00880 | Not Available | Negative | 181164 - 182366 | 42918.3 |
| 2fe-2s iron-sulfur cluster-binding protein | CKY39_RS00885 | Not Available | Negative | 182464 - 182787 | 11324.5 |
| glutamine synthetase family protein | CKY39_RS00890 | Not Available | Negative | 182803 - 184251 | 53351.8 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | CKY39_RS00895 | Not Available | Negative | 184261 - 185592 | 49458.2 |
| gntr family transcriptional regulator | CKY39_RS00900 | Not Available | Positive | 185890 - 186624 | 27130.8 |
| metallophosphoesterase | CKY39_RS00905 | Not Available | Negative | 186641 - 187447 | 29805.4 |
| hypothetical protein | CKY39_RS33645 | Not Available | Positive | 187577 - 187750 | 6066.16 |
| lysr family transcriptional regulator | CKY39_RS00910 | Not Available | Negative | 187801 - 188772 | 35583.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
