Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2345 domain-containing protein | CKY39_RS34035 | Not Available | Negative | 167265 - 167756 | 17259.8 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS00825 | Not Available | Negative | 167978 - 169843 | 69019.9 |
| lysr family transcriptional regulator | CKY39_RS00830 | Not Available | Negative | 170138 - 171052 | 33157.6 |
| alkyl/aryl-sulfatase | CKY39_RS00835 | Not Available | Positive | 171175 - 173178 | 72874.0 |
| nucleoside recognition domain-containing protein | CKY39_RS00840 | Not Available | Negative | 173185 - 174414 | 43081.0 |
| phospholipase d family protein | CKY39_RS00845 | Not Available | Positive | 174511 - 176103 | 58503.2 |
| abc transporter substrate-binding protein | CKY39_RS00850 | Not Available | Positive | 176189 - 177358 | 40096.3 |
| hypothetical protein | CKY39_RS00855 | Not Available | Positive | 177460 - 177807 | 12704.2 |
| abc transporter atp-binding protein | CKY39_RS00860 | Not Available | Negative | 177817 - 178551 | 26350.0 |
| abc transporter atp-binding protein | CKY39_RS00865 | Not Available | Negative | 178544 - 179311 | 27346.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
