Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS00775 | Not Available | Negative | 158083 - 158577 | 18410.3 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS00780 | Not Available | Negative | 158642 - 159532 | 32307.2 |
| nad-dependent epimerase/dehydratase family protein | CKY39_RS00785 | Not Available | Positive | 159628 - 160617 | 35426.8 |
| glutaminase | CKY39_RS00790 | Not Available | Negative | 160625 - 161569 | 33506.3 |
| dmt family transporter | CKY39_RS00795 | Not Available | Negative | 161566 - 162474 | 33135.3 |
| bon domain-containing protein | CKY39_RS34025 | Not Available | Negative | 162567 - 162833 | 9873.25 |
| flavin reductase family protein | CKY39_RS00805 | Not Available | Negative | 163066 - 163575 | 18060.3 |
| t6ss phospholipase effector tle1-like catalytic domain-containing protein | CKY39_RS00810 | Not Available | Negative | 163657 - 165747 | 77779.0 |
| duf3304 domain-containing protein | CKY39_RS34030 | Not Available | Negative | 165719 - 166306 | 21550.2 |
| duf4123 domain-containing protein | CKY39_RS00820 | Not Available | Negative | 166303 - 167268 | 35316.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
