Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS12235 | Not Available | Negative | 2687848 - 2688045 | 6989.14 |
| duf4124 domain-containing protein | CKY39_RS12240 | Not Available | Negative | 2688168 - 2688668 | 17936.2 |
| Transcriptional regulator | CKY39_RS12245 | Not Available | Negative | 2688684 - 2689415 | 27120.3 |
| hypothetical protein | CKY39_RS33230 | Not Available | Negative | 2689865 - 2690077 | 8168.01 |
| hypothetical protein | CKY39_RS12255 | Not Available | Positive | 2690140 - 2690505 | 12825.3 |
| hypothetical protein | CKY39_RS12260 | Not Available | Negative | 2690568 - 2690861 | 10811.0 |
| Regulatory cii-like protein | CKY39_RS12265 | Not Available | Positive | 2690860 - 2691390 | 18539.0 |
| Gp7.7 | CKY39_RS12270 | Not Available | Positive | 2691387 - 2691899 | 18318.2 |
| Hypothetical protein | CKY39_RS12275 | Not Available | Positive | 2691896 - 2692789 | 33032.1 |
| Hypothetical protein | CKY39_RS12280 | Not Available | Positive | 2692774 - 2693553 | 28973.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
