Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter substrate-binding domain-containing protein | CKY39_RS00725 | Not Available | Negative | 147248 - 148402 | 42675.7 |
| nitric oxide reductase activation protein nord | CKY39_RS00730 | Not Available | Negative | 148469 - 150106 | 59514.7 |
| cbbq/nirq/norq/gpvn family protein | CKY39_RS00735 | Not Available | Negative | 150103 - 150921 | 29986.8 |
| alpha/beta fold hydrolase | CKY39_RS00740 | Not Available | Negative | 150918 - 151928 | 37181.3 |
| aliphatic amidase | CKY39_RS00745 | Not Available | Negative | 151939 - 152976 | 38451.9 |
| urea abc transporter atp-binding subunit urte | CKY39_RS00750 | Not Available | Negative | 153020 - 153709 | 25061.7 |
| urea abc transporter atp-binding protein urtd | CKY39_RS00755 | Not Available | Negative | 153728 - 154510 | 28636.7 |
| urea abc transporter permease subunit urtc | CKY39_RS00760 | Not Available | Negative | 154525 - 155577 | 37485.9 |
| urea abc transporter permease subunit urtb | CKY39_RS00765 | Not Available | Negative | 155581 - 156483 | 32369.3 |
| urea abc transporter substrate-binding protein | CKY39_RS00770 | Not Available | Negative | 156489 - 157682 | 42730.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
