Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3100 domain-containing protein | CKY39_RS00675 | Not Available | Positive | 136798 - 138147 | 45835.4 |
| m20 aminoacylase family protein | CKY39_RS00680 | Not Available | Positive | 138295 - 139464 | 41572.6 |
| l-serine ammonia-lyase | CKY39_RS00685 | Not Available | Positive | 139469 - 140854 | 48109.0 |
| serine hydrolase domain-containing protein | CKY39_RS00690 | Not Available | Positive | 140970 - 142067 | 40087.8 |
| isocitrate lyase/pep mutase family protein | CKY39_RS00695 | Not Available | Positive | 142093 - 142923 | 29005.1 |
| uracil-dna glycosylase family protein | CKY39_RS00700 | Not Available | Positive | 142935 - 143519 | 21627.1 |
| hypothetical protein | CKY39_RS00705 | Not Available | Negative | 143500 - 145164 | 60602.3 |
| duf1127 domain-containing protein | CKY39_RS00710 | Not Available | Negative | 145229 - 145423 | 7514.05 |
| lysr family transcriptional regulator | CKY39_RS00715 | Not Available | Positive | 145514 - 146404 | 31969.2 |
| antar domain-containing response regulator | CKY39_RS00720 | Not Available | Negative | 146411 - 147064 | 24028.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
