Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | Positive | 117691 - 117766 | Not Available |
| fumarylacetoacetase | CKY39_RS00580 | Not Available | Negative | 117821 - 119143 | 47260.8 |
| cyclase family protein | CKY39_RS00585 | Not Available | Negative | 119146 - 119952 | 29935.5 |
| abc transporter permease | CKY39_RS00590 | Not Available | Negative | 120002 - 120796 | 28029.0 |
| abc transporter permease | CKY39_RS00595 | Not Available | Negative | 120793 - 121563 | 27139.2 |
| abc transporter atp-binding protein | CKY39_RS00600 | Not Available | Negative | 121556 - 122341 | 28442.5 |
| abc transporter substrate-binding protein | CKY39_RS00605 | Not Available | Negative | 122338 - 123285 | 33540.6 |
| tetr/acrr family transcriptional regulator | CKY39_RS00610 | Not Available | Negative | 123282 - 124061 | 28384.0 |
| acetoacetate--coa ligase | CKY39_RS00615 | Not Available | Positive | 124162 - 126156 | 73074.0 |
| ybay family lipoprotein | CKY39_RS00620 | Not Available | Positive | 126188 - 126631 | 15459.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
