Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS16645 | Not Available | Positive | 3601530 - 3602114 | 21236.7 |
| atp-dependent clp protease adapter clps | CKY39_RS16650 | Not Available | Positive | 3602255 - 3602614 | 13146.9 |
| atp-dependent clp protease atp-binding subunit clpa | CKY39_RS16655 | Not Available | Positive | 3602682 - 3605003 | 84700.9 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS16660 | Not Available | Positive | 3605104 - 3606551 | 52222.8 |
| exodeoxyribonuclease i | CKY39_RS16665 | Not Available | Positive | 3606552 - 3607991 | 54359.6 |
| duf3574 domain-containing protein | CKY39_RS16670 | Not Available | Positive | 3608009 - 3608443 | 15345.2 |
| gnat family n-acetyltransferase | CKY39_RS16675 | Not Available | Positive | 3608430 - 3608981 | 19669.4 |
| gnat family n-acetyltransferase | CKY39_RS16680 | Not Available | Negative | 3608978 - 3609487 | 18814.2 |
| duf72 domain-containing protein | CKY39_RS16685 | Not Available | Negative | 3609498 - 3610562 | 38088.9 |
| atp-binding protein | CKY39_RS16690 | Not Available | Positive | 3610624 - 3612102 | 53610.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
