Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3,4-dehydroadipyl-coa semialdehyde dehydrogenase | CKY39_RS00525 | Not Available | Negative | 106820 - 108370 | 53501.1 |
| duf4863 family protein | CKY39_RS00530 | Not Available | Negative | 108367 - 108861 | 17459.6 |
| helix-turn-helix transcriptional regulator | CKY39_RS00535 | Not Available | Positive | 109030 - 109977 | 33942.7 |
| 2,3-epoxybenzoyl-coa dihydrolase | CKY39_RS00540 | Not Available | Positive | 110417 - 112090 | 60443.7 |
| benzoyl-coa 2,3-epoxidase subunit boxb | CKY39_RS00545 | Not Available | Positive | 112226 - 113653 | 53822.7 |
| benzoyl-coa 2,3-epoxidase subunit boxa | CKY39_RS00550 | Not Available | Positive | 113704 - 114984 | 46309.1 |
| maoc family dehydratase | CKY39_RS00555 | Not Available | Positive | 114995 - 115441 | 16395.6 |
| adhesin | CKY39_RS00560 | Not Available | Negative | 115548 - 116024 | 13974.2 |
| rrf2 family transcriptional regulator | CKY39_RS00565 | Not Available | Positive | 116274 - 116735 | 15921.4 |
| nad(p)/fad-dependent oxidoreductase | CKY39_RS00570 | Not Available | Positive | 116725 - 117627 | 31229.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
