Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS16345 | Not Available | Positive | 3537636 - 3538055 | 15070.2 |
| d-amino acid dehydrogenase | CKY39_RS16350 | Not Available | Negative | 3538045 - 3539298 | 44601.8 |
| amidase | CKY39_RS16355 | Not Available | Negative | 3539356 - 3540678 | 45699.5 |
| 30s ribosomal protein s2 | CKY39_RS16360 | Not Available | Positive | 3540884 - 3541639 | 27398.2 |
| translation elongation factor ts | CKY39_RS16365 | Not Available | Positive | 3541721 - 3542644 | 32507.1 |
| ump kinase | CKY39_RS16370 | Not Available | Positive | 3542744 - 3543466 | 25421.1 |
| ribosome recycling factor | CKY39_RS16375 | Not Available | Positive | 3543478 - 3544038 | 20527.7 |
| polyprenyl diphosphate synthase | CKY39_RS16380 | Not Available | Positive | 3544047 - 3544772 | 26420.6 |
| phosphatidate cytidylyltransferase | CKY39_RS16385 | Not Available | Positive | 3544797 - 3545642 | 30411.5 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | CKY39_RS16390 | Not Available | Positive | 3545639 - 3546826 | 41842.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
