Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ldh family oxidoreductase | CKY39_RS15955 | Not Available | Negative | 3469162 - 3470226 | 37550.2 |
| phosphoserine phosphatase serb | CKY39_RS15960 | Not Available | Negative | 3470223 - 3470936 | 25452.0 |
| transcription-repair coupling factor | CKY39_RS15965 | Not Available | Negative | 3470933 - 3474415 | 129200.0 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | CKY39_RS15970 | Not Available | Positive | 3474534 - 3475247 | 25146.4 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | CKY39_RS15975 | Not Available | Positive | 3475244 - 3475735 | 17083.7 |
| sensor histidine kinase | CKY39_RS15980 | Not Available | Negative | 3475751 - 3477172 | 52109.7 |
| two-component system response regulator ompr | CKY39_RS15985 | Not Available | Negative | 3477250 - 3477981 | 27176.9 |
| hypothetical protein | CKY39_RS15990 | Not Available | Positive | 3478077 - 3478514 | 15620.7 |
| simpl domain-containing protein | CKY39_RS15995 | Not Available | Positive | 3478569 - 3479276 | 24575.3 |
| 3-hydroxybutyrate dehydrogenase | CKY39_RS16000 | Not Available | Negative | 3479341 - 3480111 | 26948.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
