Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS15905 | Not Available | Negative | 3461435 - 3461674 | 8280.76 |
| cobyric acid synthase | CKY39_RS15910 | Not Available | Positive | 3461768 - 3463234 | 51909.0 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | CKY39_RS15915 | Not Available | Positive | 3463231 - 3464274 | 35560.2 |
| adenosylcobinamide-gdp ribazoletransferase | CKY39_RS15920 | Not Available | Positive | 3464271 - 3465065 | 26655.2 |
| histidine phosphatase family protein | CKY39_RS15925 | Not Available | Positive | 3465062 - 3465634 | 20196.9 |
| ivy family c-type lysozyme inhibitor | CKY39_RS15930 | Not Available | Negative | 3465645 - 3466502 | 31012.0 |
| endonuclease iii | CKY39_RS15935 | Not Available | Negative | 3466524 - 3467171 | 23818.1 |
| plp-dependent aminotransferase family protein | CKY39_RS15940 | Not Available | Positive | 3467347 - 3468534 | 42492.4 |
| hypothetical protein | CKY39_RS15945 | Not Available | Negative | 3468544 - 3468771 | 7968.81 |
| duf6172 family protein | CKY39_RS15950 | Not Available | Positive | 3468829 - 3469155 | 12482.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
