Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lrgb family protein | CKY39_RS15865 | Not Available | Positive | 3451268 - 3451996 | 24998.7 |
| osmc family protein | CKY39_RS15870 | Not Available | Positive | 3452032 - 3452496 | 17245.5 |
| fmn-binding negative transcriptional regulator | CKY39_RS34375 | Not Available | Positive | 3452580 - 3452972 | 14353.2 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS34865 | Not Available | Positive | 3452969 - 3453019 | 1945.16 |
| hypothetical protein | CKY39_RS34380 | Not Available | Positive | 3453047 - 3453208 | 6018.36 |
| lysr family transcriptional regulator | CKY39_RS15880 | Not Available | Negative | 3453230 - 3454144 | 34046.7 |
| alpha/beta hydrolase | CKY39_RS15885 | Not Available | Positive | 3454326 - 3455207 | 30471.1 |
| efflux rnd transporter periplasmic adaptor subunit | CKY39_RS15890 | Not Available | Positive | 3455363 - 3456616 | 44251.8 |
| efflux rnd transporter permease subunit | CKY39_RS15895 | Not Available | Positive | 3456657 - 3459929 | 116737.0 |
| efflux transporter outer membrane subunit | CKY39_RS15900 | Not Available | Positive | 3459955 - 3461418 | 51572.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
