Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbon-nitrogen hydrolase family protein | CKY39_RS15765 | Not Available | Negative | 3431069 - 3432073 | 36226.3 |
| helix-turn-helix domain-containing protein | CKY39_RS15770 | Not Available | Positive | 3432253 - 3433218 | 35301.2 |
| universal stress protein | CKY39_RS15775 | Not Available | Negative | 3433264 - 3433689 | 15038.2 |
| sulfite exporter taue/safe family protein | CKY39_RS15780 | Not Available | Negative | 3433763 - 3434590 | 28190.7 |
| cell division protein zapa | CKY39_RS15785 | Not Available | Negative | 3434883 - 3435218 | 11511.8 |
| hypothetical protein | CKY39_RS15790 | Not Available | Negative | 3435215 - 3435442 | 8475.01 |
| tonb-dependent receptor domain-containing protein | CKY39_RS15795 | Not Available | Positive | 3435888 - 3437840 | 69666.8 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS15800 | Not Available | Positive | 3437825 - 3439221 | 48476.5 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | CKY39_RS15805 | Not Available | Positive | 3439208 - 3439789 | 20775.4 |
| abc transporter substrate-binding protein | CKY39_RS15810 | Not Available | Positive | 3439801 - 3440667 | 30521.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
