Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tautomerase family protein | CKY39_RS00475 | Not Available | Negative | 97794 - 98018 | 8684.39 |
| sdr family nad(p)-dependent oxidoreductase | CKY39_RS00480 | Not Available | Negative | 98050 - 98790 | 25665.8 |
| lysr family transcriptional regulator | CKY39_RS00485 | Not Available | Positive | 98898 - 99809 | 33829.9 |
| abc transporter atp-binding protein | CKY39_RS00490 | Not Available | Negative | 99826 - 100527 | 25315.1 |
| abc transporter atp-binding protein | CKY39_RS00495 | Not Available | Negative | 100527 - 101279 | 26830.1 |
| branched-chain amino acid abc transporter permease | CKY39_RS00500 | Not Available | Negative | 101276 - 102259 | 34107.9 |
| branched-chain amino acid abc transporter permease | CKY39_RS00505 | Not Available | Negative | 102256 - 103128 | 31414.7 |
| abc transporter substrate-binding protein | CKY39_RS00510 | Not Available | Negative | 103234 - 104409 | 41478.7 |
| alpha/beta fold hydrolase | CKY39_RS00515 | Not Available | Negative | 104406 - 105239 | 30802.5 |
| benzoate-coa ligase family protein | CKY39_RS00520 | Not Available | Negative | 105236 - 106789 | 56204.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
