Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CKY39_RS15715 | Not Available | Negative | 3421113 - 3422051 | 33826.7 |
| sdr family oxidoreductase | CKY39_RS15720 | Not Available | Positive | 3422192 - 3422965 | 27078.1 |
| hypothetical protein | CKY39_RS15725 | Not Available | Positive | 3423008 - 3423277 | 9471.03 |
| prolipoprotein diacylglyceryl transferase | CKY39_RS15730 | Not Available | Positive | 3423335 - 3424165 | 31201.5 |
| gntr family transcriptional regulator | CKY39_RS15735 | Not Available | Positive | 3424355 - 3425023 | 25169.3 |
| malonyl-coa decarboxylase | CKY39_RS15740 | Not Available | Positive | 3425064 - 3426530 | 54270.2 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS15745 | Not Available | Positive | 3426624 - 3427613 | 34430.5 |
| enoyl-coa hydratase/isomerase family protein | CKY39_RS15750 | Not Available | Positive | 3427610 - 3428392 | 27469.0 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS15755 | Not Available | Positive | 3428395 - 3429962 | 56975.3 |
| phenylacetaldoxime dehydratase family protein | CKY39_RS15760 | Not Available | Negative | 3429984 - 3431048 | 39534.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
