Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent oxidoreductase | CKY39_RS15665 | Not Available | Negative | 3411665 - 3412282 | 21782.9 |
| lysr family transcriptional regulator | CKY39_RS15670 | Not Available | Positive | 3412390 - 3413298 | 32888.6 |
| yqha family protein | CKY39_RS15675 | Not Available | Negative | 3413306 - 3413941 | 22935.4 |
| acetate--coa ligase | CKY39_RS15680 | Not Available | Positive | 3414093 - 3416090 | 72584.9 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS15685 | Not Available | Positive | 3416290 - 3416789 | 18301.0 |
| c-type cytochrome | CKY39_RS15690 | Not Available | Negative | 3416826 - 3417131 | 10488.9 |
| tigr04438 family trp-rich protein | CKY39_RS15695 | Not Available | Positive | 3417239 - 3417496 | 10041.3 |
| duf3592 domain-containing protein | CKY39_RS15700 | Not Available | Positive | 3417543 - 3418361 | 29021.2 |
| dihydroxy-acid dehydratase | CKY39_RS15705 | Not Available | Negative | 3418369 - 3420063 | 59177.4 |
| lysr family transcriptional regulator | CKY39_RS15710 | Not Available | Positive | 3420168 - 3421109 | 34148.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
