Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 3400775 - 3400865 | Not Available |
| duf6806 family protein | CKY39_RS15620 | Not Available | Positive | 3400889 - 3401527 | 23491.3 |
| mfs transporter | CKY39_RS15625 | Not Available | Positive | 3401559 - 3402875 | 46108.9 |
| hypothetical protein | CKY39_RS15630 | Not Available | Negative | 3402883 - 3403671 | 29052.8 |
| glutamate racemase | CKY39_RS15635 | Not Available | Negative | 3403688 - 3404500 | 27972.3 |
| fumarate hydratase | CKY39_RS15640 | Not Available | Negative | 3404497 - 3406050 | 55038.4 |
| glycine betaine/l-proline abc transporter substrate-binding protein prox | CKY39_RS15645 | Not Available | Negative | 3406154 - 3407164 | 37080.1 |
| glycine betaine/l-proline abc transporter permease prow | CKY39_RS15650 | Not Available | Negative | 3407187 - 3408371 | 41620.7 |
| glycine betaine/l-proline abc transporter atp-binding protein prov | CKY39_RS15655 | Not Available | Negative | 3408393 - 3409646 | 45142.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS15660 | Not Available | Positive | 3410204 - 3411600 | 50685.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
