Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| potassium transporter kup | CKY39_RS15565 | Not Available | Positive | 3387871 - 3389715 | 66051.1 |
| efflux rnd transporter periplasmic adaptor subunit | CKY39_RS15570 | Not Available | Positive | 3389825 - 3391027 | 41825.8 |
| efflux rnd transporter permease subunit | CKY39_RS15575 | Not Available | Positive | 3391024 - 3394203 | 115249.0 |
| Trna-leu | Not Available | Not Available | Positive | 3394409 - 3394495 | Not Available |
| trigger factor | CKY39_RS15585 | Not Available | Positive | 3394522 - 3395835 | 48728.9 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | CKY39_RS15590 | Not Available | Positive | 3395959 - 3396567 | 22242.8 |
| atp-dependent clp protease atp-binding subunit clpx | CKY39_RS15595 | Not Available | Positive | 3396678 - 3397946 | 46396.1 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS15600 | Not Available | Positive | 3397962 - 3400402 | 86925.7 |
| Trna-gly | Not Available | Not Available | Positive | 3400464 - 3400539 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 3400603 - 3400676 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
