Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1993 family protein | CKY39_RS15515 | Not Available | Positive | 3380144 - 3380650 | 18560.4 |
| class i sam-dependent methyltransferase | CKY39_RS15520 | Not Available | Negative | 3380657 - 3381508 | 31075.4 |
| ferrochelatase | CKY39_RS15525 | Not Available | Negative | 3381505 - 3382536 | 38085.4 |
| had family hydrolase | CKY39_RS15530 | Not Available | Positive | 3382552 - 3383283 | 26511.7 |
| nipsnap family protein | CKY39_RS15535 | Not Available | Negative | 3383287 - 3383592 | 11856.1 |
| lyse family translocator | CKY39_RS15540 | Not Available | Positive | 3383701 - 3384342 | 22459.0 |
| hypothetical protein | CKY39_RS15545 | Not Available | Negative | 3384361 - 3384669 | 11291.8 |
| hydroxysqualene dehydroxylase hpne | CKY39_RS15550 | Not Available | Negative | 3384666 - 3385931 | 44102.6 |
| presqualene diphosphate synthase hpnd | CKY39_RS15555 | Not Available | Negative | 3385951 - 3386790 | 31555.0 |
| squalene synthase hpnc | CKY39_RS15560 | Not Available | Negative | 3386787 - 3387647 | 32088.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
