Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | CKY39_RS15420 | Not Available | Negative | 3358146 - 3359564 | 51465.4 |
| response regulator transcription factor | CKY39_RS15425 | Not Available | Negative | 3359585 - 3360265 | 25087.8 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS15430 | Not Available | Positive | 3360398 - 3361357 | 32831.6 |
| tripartite tricarboxylate transporter tctb family protein | CKY39_RS15435 | Not Available | Positive | 3361500 - 3362051 | 18991.1 |
| tripartite tricarboxylate transporter permease | CKY39_RS15440 | Not Available | Positive | 3362067 - 3363590 | 53156.5 |
| dmt family transporter | CKY39_RS15445 | Not Available | Positive | 3363799 - 3364134 | 11433.3 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS15450 | Not Available | Negative | 3364165 - 3367274 | 111360.0 |
| efflux rnd transporter periplasmic adaptor subunit | CKY39_RS15455 | Not Available | Negative | 3367295 - 3368479 | 40613.5 |
| efflux transporter outer membrane subunit | CKY39_RS15460 | Not Available | Negative | 3368476 - 3369966 | 51614.5 |
| cerr family c-terminal domain-containing protein | CKY39_RS15465 | Not Available | Negative | 3369963 - 3370511 | 20651.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
