Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS33290 | Not Available | Positive | 3350427 - 3350681 | 9504.52 |
| ap2 domain-containing protein | CKY39_RS15375 | Not Available | Negative | 3350773 - 3351507 | 27059.2 |
| crp/fnr family transcriptional regulator | CKY39_RS15380 | Not Available | Negative | 3351550 - 3352260 | 25907.0 |
| hypothetical protein | CKY39_RS15385 | Not Available | Negative | 3352419 - 3353072 | 23809.6 |
| arac family transcriptional regulator | CKY39_RS15390 | Not Available | Positive | 3353455 - 3354480 | 37784.1 |
| winged-helix domain-containing protein | CKY39_RS15395 | Not Available | Positive | 3354772 - 3355560 | 29534.6 |
| c-type cytochrome | CKY39_RS15400 | Not Available | Negative | 3355569 - 3355934 | 12893.7 |
| hypothetical protein | CKY39_RS15405 | Not Available | Positive | 3356108 - 3356788 | 24013.9 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS15410 | Not Available | Negative | 3356805 - 3357610 | 31050.0 |
| rna-binding s4 domain-containing protein | CKY39_RS15415 | Not Available | Negative | 3357659 - 3358126 | 17496.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
