Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 7tm diverse intracellular signaling domain-containing protein | CKY39_RS15325 | Not Available | Positive | 3340589 - 3342436 | 67274.6 |
| lysr family transcriptional regulator | CKY39_RS15330 | Not Available | Negative | 3342455 - 3343384 | 34223.1 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS15335 | Not Available | Positive | 3343671 - 3344483 | 28561.7 |
| helix-turn-helix domain-containing protein | CKY39_RS15340 | Not Available | Positive | 3344545 - 3345765 | 42751.9 |
| hypothetical protein | CKY39_RS15345 | Not Available | Positive | 3345814 - 3346512 | 24663.6 |
| duf899 domain-containing protein | CKY39_RS15350 | Not Available | Positive | 3346539 - 3347297 | 28921.0 |
| hypothetical protein | CKY39_RS15355 | Not Available | Positive | 3347333 - 3347902 | 19377.3 |
| putative fmn-dependent luciferase-like monooxygenase | CKY39_RS15360 | Not Available | Positive | 3348007 - 3349077 | 37691.9 |
| cmd domain protein | CKY39_RS15365 | Not Available | Positive | 3349090 - 3349713 | 21854.0 |
| alkylhydroperoxidase domain protein | CKY39_RS15370 | Not Available | Positive | 3349739 - 3350332 | 21630.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
