Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase carboxyltransferase subunit alpha | CKY39_RS15230 | Not Available | Positive | 3327121 - 3328101 | 36616.7 |
| trna lysidine(34) synthetase tils | CKY39_RS15235 | Not Available | Positive | 3328122 - 3329099 | 34917.6 |
| aspartate kinase | CKY39_RS15240 | Not Available | Positive | 3329155 - 3330423 | 45471.5 |
| Trna-ser | Not Available | Not Available | Positive | 3330451 - 3330543 | Not Available |
| hypothetical protein | CKY39_RS15250 | Not Available | Negative | 3330511 - 3330894 | 13972.6 |
| cellulose synthase | CKY39_RS15255 | Not Available | Positive | 3331316 - 3331624 | 10514.8 |
| hypothetical protein | CKY39_RS33275 | Not Available | Positive | 3331797 - 3331961 | 5628.07 |
| major capsid protein | CKY39_RS15265 | Not Available | Positive | 3332052 - 3332276 | 7534.45 |
| hypothetical protein | CKY39_RS33280 | Not Available | Positive | 3332332 - 3332679 | 11636.5 |
| virulence factor tspb c-terminal domain-related protein | CKY39_RS33285 | Not Available | Positive | 3333427 - 3334053 | 22281.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
