Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS33755 | Not Available | Positive | 3317677 - 3317841 | 6236.58 |
| duf349 domain-containing protein | CKY39_RS15185 | Not Available | Positive | 3317838 - 3320684 | 100069.0 |
| gyd domain-containing protein | CKY39_RS15190 | Not Available | Negative | 3320757 - 3321050 | 10669.0 |
| zinc-dependent peptidase | CKY39_RS15195 | Not Available | Negative | 3321282 - 3322073 | 29346.0 |
| udp-2,3-diacylglucosamine diphosphatase | CKY39_RS15200 | Not Available | Negative | 3322088 - 3322864 | 28566.9 |
| peptidylprolyl isomerase | CKY39_RS15205 | Not Available | Negative | 3322890 - 3323402 | 18334.8 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS15210 | Not Available | Negative | 3323430 - 3323977 | 18655.8 |
| tetratricopeptide repeat protein | CKY39_RS15215 | Not Available | Negative | 3324133 - 3324723 | 21388.5 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS15220 | Not Available | Positive | 3324920 - 3326295 | 48441.4 |
| dna-3-methyladenine glycosylase family protein | CKY39_RS15225 | Not Available | Positive | 3326292 - 3326963 | 25101.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
