Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | CKY39_RS15135 | Not Available | Negative | 3304980 - 3306167 | 43409.9 |
| transcription antitermination factor nusb | CKY39_RS15140 | Not Available | Negative | 3306256 - 3306786 | 19430.0 |
| 6,7-dimethyl-8-ribityllumazine synthase | CKY39_RS15145 | Not Available | Negative | 3306783 - 3307244 | 16031.2 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | CKY39_RS15150 | Not Available | Negative | 3307251 - 3308405 | 40876.2 |
| riboflavin synthase | CKY39_RS15155 | Not Available | Negative | 3308402 - 3309073 | 23300.7 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | CKY39_RS15160 | Not Available | Negative | 3309160 - 3310290 | 39741.7 |
| transcriptional regulator nrdr | CKY39_RS15165 | Not Available | Negative | 3310319 - 3310762 | 17123.7 |
| serine hydroxymethyltransferase | CKY39_RS15170 | Not Available | Negative | 3310796 - 3312040 | 44721.8 |
| lytic transglycosylase domain-containing protein | CKY39_RS15175 | Not Available | Negative | 3312255 - 3313115 | 30310.4 |
| duf748 domain-containing protein | CKY39_RS15180 | Not Available | Positive | 3313829 - 3317632 | 133846.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
