Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pirin family protein | CKY39_RS15090 | Not Available | Positive | 3290110 - 3291033 | 33165.6 |
| sulfurtransferase | CKY39_RS15095 | Not Available | Negative | 3291043 - 3291828 | 28878.4 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS15100 | Not Available | Positive | 3291890 - 3295407 | 123903.0 |
| ygiw/ydei family stress tolerance ob fold protein | CKY39_RS34365 | Not Available | Positive | 3295560 - 3295874 | 11531.6 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS15105 | Not Available | Negative | 3295980 - 3301076 | 187819.0 |
| sprt-like domain-containing protein | CKY39_RS15110 | Not Available | Negative | 3301073 - 3302311 | 44281.5 |
| cell envelope integrity protein tola | CKY39_RS15115 | Not Available | Negative | 3302404 - 3303330 | 33032.2 |
| exbd/tolr family protein | CKY39_RS15120 | Not Available | Negative | 3303334 - 3303771 | 15428.0 |
| protein tolq | CKY39_RS15125 | Not Available | Negative | 3303806 - 3304528 | 26062.6 |
| tol-pal system-associated acyl-coa thioesterase | CKY39_RS15130 | Not Available | Negative | 3304525 - 3304983 | 17029.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
