Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CKY39_RS15040 | Not Available | Positive | 3281542 - 3282420 | 32344.6 |
| abc transporter substrate-binding protein | CKY39_RS15045 | Not Available | Negative | 3282427 - 3283515 | 37697.4 |
| energy transducer tonb | CKY39_RS34760 | Not Available | Positive | 3283741 - 3284244 | 17933.8 |
| trna (guanosine(46)-n7)-methyltransferase trmb | CKY39_RS15055 | Not Available | Negative | 3284266 - 3285039 | 28379.1 |
| trna glutamyl-q(34) synthetase gluqrs | CKY39_RS15060 | Not Available | Negative | 3285036 - 3285941 | 32767.7 |
| nad(p)/fad-dependent oxidoreductase | CKY39_RS15065 | Not Available | Negative | 3285948 - 3287030 | 39224.8 |
| lysr family transcriptional regulator | CKY39_RS15070 | Not Available | Negative | 3287147 - 3288100 | 34093.3 |
| pirin family protein | CKY39_RS15075 | Not Available | Positive | 3288264 - 3288965 | 25461.9 |
| doxx family protein | CKY39_RS15080 | Not Available | Positive | 3289021 - 3289446 | 14534.3 |
| flavodoxin family protein | CKY39_RS15085 | Not Available | Positive | 3289523 - 3290074 | 19333.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
