Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tricarballylate utilization 4fe-4s protein tcub | CKY39_RS14990 | Not Available | Negative | 3271720 - 3272949 | 44769.1 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS14995 | Not Available | Negative | 3272933 - 3274359 | 52354.1 |
| lysr substrate-binding domain-containing protein | CKY39_RS15000 | Not Available | Negative | 3274437 - 3275363 | 33141.4 |
| bile acid:sodium symporter family protein | CKY39_RS15005 | Not Available | Negative | 3275371 - 3276249 | 30847.0 |
| class ii aldolase/adducin family protein | CKY39_RS15010 | Not Available | Negative | 3276350 - 3277117 | 28042.6 |
| hd domain-containing protein | CKY39_RS15015 | Not Available | Negative | 3277138 - 3277728 | 22453.6 |
| crp/fnr family transcriptional regulator | CKY39_RS15020 | Not Available | Positive | 3277850 - 3278572 | 25952.7 |
| alpha/beta hydrolase | CKY39_RS15025 | Not Available | Positive | 3278675 - 3279364 | 24290.0 |
| mfs transporter | CKY39_RS15030 | Not Available | Negative | 3279371 - 3280894 | 51921.0 |
| gnat family n-acetyltransferase | CKY39_RS15035 | Not Available | Negative | 3280891 - 3281466 | 20760.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
