Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | CKY39_RS14940 | Not Available | Positive | 3259346 - 3260311 | 34889.5 |
| murr/rpir family transcriptional regulator | CKY39_RS14945 | Not Available | Positive | 3260409 - 3261242 | 30320.6 |
| had-iia family hydrolase | CKY39_RS14950 | Not Available | Negative | 3261179 - 3262054 | 30671.0 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | CKY39_RS14955 | Not Available | Positive | 3262242 - 3263177 | 32564.4 |
| phosphonate abc transporter atp-binding protein | CKY39_RS14960 | Not Available | Positive | 3263186 - 3263986 | 28209.3 |
| phosphonate abc transporter, permease protein phne | CKY39_RS14965 | Not Available | Positive | 3263983 - 3264981 | 36694.2 |
| hypothetical protein | CKY39_RS14970 | Not Available | Positive | 3265129 - 3265317 | 5865.11 |
| phosphocholine-specific phospholipase c | CKY39_RS14975 | Not Available | Positive | 3265387 - 3267639 | 82246.3 |
| yada family autotransporter adhesin | CKY39_RS14980 | Not Available | Positive | 3267645 - 3269063 | 45775.8 |
| glycoside hydrolase family 3 n-terminal domain-containing protein | CKY39_RS14985 | Not Available | Negative | 3269340 - 3271619 | 81422.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
