Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent monooxygenase | CKY39_RS14790 | Not Available | Positive | 3227969 - 3229138 | 41227.9 |
| recombinase-like helix-turn-helix domain-containing protein | CKY39_RS14795 | Not Available | Positive | 3229169 - 3229390 | 8093.57 |
| aromatic ring-hydroxylating oxygenase subunit alpha | CKY39_RS14800 | Not Available | Positive | 3229402 - 3230445 | 39637.2 |
| pdr/vanb family oxidoreductase | CKY39_RS14805 | Not Available | Positive | 3230469 - 3231437 | 34863.8 |
| porin | CKY39_RS14810 | Not Available | Positive | 3231493 - 3232599 | 38359.3 |
| mfs transporter | CKY39_RS14815 | Not Available | Positive | 3232647 - 3233963 | 46366.8 |
| m1 family metallopeptidase | CKY39_RS14820 | Not Available | Positive | 3234620 - 3236857 | 81759.8 |
| hypothetical protein | CKY39_RS14825 | Not Available | Positive | 3236938 - 3237345 | 15136.2 |
| transporter substrate-binding domain-containing protein | CKY39_RS14830 | Not Available | Negative | 3237498 - 3238232 | 25222.4 |
| substrate-binding domain-containing protein | CKY39_RS14835 | Not Available | Negative | 3238303 - 3239151 | 29309.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
