Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| septum site-determining protein mind | CKY39_RS00375 | Not Available | Negative | 74716 - 75531 | 29362.4 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS00380 | Not Available | Negative | 75600 - 76375 | 28125.0 |
| solute carrier family 23 protein | CKY39_RS00385 | Not Available | Negative | 76507 - 77793 | 43873.0 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS00390 | Not Available | Negative | 77954 - 78375 | 14844.6 |
| asma-like c-terminal region-containing protein | CKY39_RS00395 | Not Available | Positive | 78463 - 79785 | 47313.1 |
| tripartite tricarboxylate transporter permease | CKY39_RS00400 | Not Available | Negative | 79932 - 81275 | 46954.7 |
| hypothetical protein | CKY39_RS00405 | Not Available | Negative | 81317 - 81772 | 15953.1 |
| hydroxymethylglutaryl-coa reductase, degradative | CKY39_RS00410 | Not Available | Negative | 81866 - 83152 | 44869.5 |
| plp-dependent aminotransferase family protein | CKY39_RS00415 | Not Available | Positive | 83290 - 84678 | 50699.2 |
| crotonase/enoyl-coa hydratase family protein | CKY39_RS00420 | Not Available | Negative | 84680 - 85465 | 26697.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
