Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter outer membrane subunit | CKY39_RS14645 | Not Available | Positive | 3183569 - 3186979 | 123844.0 |
| transglutaminase-like domain-containing protein | CKY39_RS14650 | Not Available | Negative | 3187034 - 3187840 | 30023.6 |
| srpbcc family protein | CKY39_RS14655 | Not Available | Negative | 3187910 - 3188353 | 16435.8 |
| lysr family transcriptional regulator | CKY39_RS14660 | Not Available | Negative | 3188422 - 3189321 | 32409.5 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS14665 | Not Available | Positive | 3189422 - 3190393 | 33848.4 |
| caib/baif coa transferase family protein | CKY39_RS14670 | Not Available | Positive | 3190398 - 3191627 | 42764.2 |
| sensor histidine kinase | CKY39_RS34350 | Not Available | Negative | 3191835 - 3191975 | 4675.67 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS34855 | Not Available | Negative | 3192110 - 3194200 | 76105.4 |
| fecr domain-containing protein | CKY39_RS14680 | Not Available | Negative | 3194216 - 3195508 | 45849.8 |
| response regulator transcription factor | CKY39_RS14685 | Not Available | Negative | 3195508 - 3196254 | 28029.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
