Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| error-prone dna polymerase | CKY39_RS14545 | Not Available | Positive | 3163121 - 3166471 | 125150.0 |
| hypothetical protein | CKY39_RS14550 | Not Available | Positive | 3166542 - 3167468 | 33113.1 |
| phosphotransferase enzyme family protein | CKY39_RS14555 | Not Available | Negative | 3167488 - 3168504 | 38164.0 |
| rna 2',3'-cyclic phosphodiesterase | CKY39_RS14560 | Not Available | Negative | 3168583 - 3169188 | 23160.6 |
| hypothetical protein | CKY39_RS14565 | Not Available | Negative | 3169225 - 3169461 | 8899.31 |
| sgnh/gdsl hydrolase family protein | CKY39_RS14570 | Not Available | Negative | 3169540 - 3170808 | 44356.2 |
| lysr family transcriptional regulator | CKY39_RS14575 | Not Available | Positive | 3170919 - 3171827 | 33054.2 |
| ku protein | CKY39_RS14580 | Not Available | Negative | 3171830 - 3172744 | 33527.9 |
| dna ligase d | CKY39_RS14585 | Not Available | Negative | 3172778 - 3175303 | 92557.9 |
| hypothetical protein | CKY39_RS14590 | Not Available | Positive | 3175550 - 3175825 | 9683.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
