Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa dehydrogenase family protein | CKY39_RS14450 | Not Available | Positive | 3142062 - 3143300 | 44053.2 |
| tripartite tricarboxylate transporter substrate binding protein | CKY39_RS14455 | Not Available | Positive | 3143335 - 3144333 | 34496.9 |
| paqr family membrane homeostasis protein trha | CKY39_RS14460 | Not Available | Negative | 3144344 - 3144967 | 22191.4 |
| sialic acid trap transporter substrate-binding protein siap | CKY39_RS14465 | Not Available | Positive | 3145173 - 3146168 | 36500.1 |
| arac family transcriptional regulator | CKY39_RS14470 | Not Available | Negative | 3146165 - 3147184 | 38035.0 |
| crotonase/enoyl-coa hydratase family protein | CKY39_RS14475 | Not Available | Positive | 3147328 - 3148119 | 27728.7 |
| gtpase/duf3482 domain-containing protein | CKY39_RS14480 | Not Available | Negative | 3148129 - 3149553 | 51229.1 |
| duf2868 domain-containing protein | CKY39_RS14485 | Not Available | Negative | 3149550 - 3150935 | 49426.0 |
| hypothetical protein | CKY39_RS14490 | Not Available | Negative | 3151103 - 3151402 | 10977.4 |
| type vi secretion system baseplate subunit tsse | CKY39_RS14495 | Not Available | Positive | 3151401 - 3151991 | 21763.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
