Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| caib/baif coa transferase family protein | CKY39_RS14405 | Not Available | Positive | 3132455 - 3133609 | 41086.3 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS14410 | Not Available | Positive | 3133663 - 3134631 | 33527.5 |
| acyclic terpene utilization atua family protein | CKY39_RS14415 | Not Available | Positive | 3134640 - 3136448 | 62873.1 |
| hypothetical protein | CKY39_RS14420 | Not Available | Positive | 3136648 - 3137271 | 21884.6 |
| srpbcc family protein | CKY39_RS14425 | Not Available | Negative | 3137278 - 3137823 | 20273.0 |
| arsr/smtb family transcription factor | CKY39_RS14430 | Not Available | Negative | 3137864 - 3138223 | 13165.6 |
| class a beta-lactamase | CKY39_RS14435 | Not Available | Positive | 3138399 - 3139286 | 30909.1 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS34330 | Not Available | Positive | 3139334 - 3139456 | 4437.47 |
| lysr substrate-binding domain-containing protein | CKY39_RS34335 | Not Available | Positive | 3139801 - 3140328 | 18626.5 |
| amp-binding protein | CKY39_RS14445 | Not Available | Positive | 3140470 - 3142041 | 56390.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
