Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| voc family protein | CKY39_RS00325 | Not Available | Positive | 65460 - 66353 | 31565.5 |
| winged helix-turn-helix transcriptional regulator | CKY39_RS00330 | Not Available | Negative | 66363 - 66785 | 15395.9 |
| dihydrofolate reductase family protein | CKY39_RS00335 | Not Available | Positive | 66896 - 67486 | 21770.9 |
| rcnb family protein | CKY39_RS00340 | Not Available | Positive | 67633 - 68094 | 17333.2 |
| hypothetical protein | CKY39_RS00345 | Not Available | Negative | 68185 - 68454 | 9790.48 |
| cysb family hth-type transcriptional regulator | CKY39_RS00350 | Not Available | Negative | 68568 - 69512 | 34645.9 |
| tetr/acrr family transcriptional regulator | CKY39_RS00355 | Not Available | Positive | 69691 - 70293 | 22140.5 |
| alpha/beta fold hydrolase | CKY39_RS00360 | Not Available | Positive | 70511 - 71410 | 32337.0 |
| sel1-like repeat protein | CKY39_RS00365 | Not Available | Positive | 71504 - 74416 | 107034.0 |
| cell division topological specificity factor mine | CKY39_RS00370 | Not Available | Negative | 74441 - 74713 | 10197.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
