Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS14210 | Not Available | Positive | 3087447 - 3089615 | 79544.6 |
| zf-tfiib domain-containing protein | CKY39_RS14215 | Not Available | Positive | 3089630 - 3090175 | 20751.8 |
| dna repair atpase | CKY39_RS14220 | Not Available | Positive | 3090188 - 3095455 | 195570.0 |
| phospholipase d-like domain-containing protein | CKY39_RS14225 | Not Available | Positive | 3095610 - 3096152 | 20269.9 |
| hypothetical protein | CKY39_RS14230 | Not Available | Positive | 3096152 - 3096925 | 28497.7 |
| caib/baif coa transferase family protein | CKY39_RS14235 | Not Available | Positive | 3097034 - 3098206 | 41777.2 |
| hydroxymethylglutaryl-coa lyase | CKY39_RS14240 | Not Available | Positive | 3098203 - 3099186 | 35287.4 |
| voc family protein | CKY39_RS14245 | Not Available | Positive | 3099183 - 3099563 | 14003.0 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS14250 | Not Available | Positive | 3099597 - 3100562 | 34134.1 |
| hypothetical protein | CKY39_RS33740 | Not Available | Negative | 3100579 - 3100725 | 4985.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
