Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1266 domain-containing protein | CKY39_RS14160 | Not Available | Positive | 3078320 - 3079120 | 29413.8 |
| class i sam-dependent methyltransferase | CKY39_RS14165 | Not Available | Negative | 3079128 - 3079958 | 31131.6 |
| sigma-54-dependent fis family transcriptional regulator | CKY39_RS14170 | Not Available | Negative | 3080015 - 3081910 | 67594.1 |
| aldehyde dehydrogenase | CKY39_RS14175 | Not Available | Positive | 3082144 - 3083664 | 55817.9 |
| duf779 domain-containing protein | CKY39_RS14180 | Not Available | Positive | 3083664 - 3084041 | 13657.4 |
| lysr family transcriptional regulator | CKY39_RS14185 | Not Available | Negative | 3084057 - 3084974 | 32678.7 |
| yjfi family protein | CKY39_RS14190 | Not Available | Positive | 3085116 - 3085532 | 14758.7 |
| pspa/im30 family protein | CKY39_RS14195 | Not Available | Positive | 3085545 - 3086276 | 26661.6 |
| hypothetical protein | CKY39_RS14200 | Not Available | Positive | 3086279 - 3086638 | 13148.8 |
| ob-fold-containig protein | CKY39_RS14205 | Not Available | Positive | 3086681 - 3087325 | 22413.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
