Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ethanolamine permease | CKY39_RS14115 | Not Available | Negative | 3066213 - 3067619 | 49711.4 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | CKY39_RS14120 | Not Available | Positive | 3067756 - 3068169 | 14284.2 |
| pentapeptide repeat-containing protein | CKY39_RS14125 | Not Available | Positive | 3068455 - 3068949 | 17816.7 |
| hypothetical protein | CKY39_RS33265 | Not Available | Positive | 3068959 - 3069426 | 16216.7 |
| glucan biosynthesis protein | CKY39_RS14130 | Not Available | Negative | 3069595 - 3071193 | 59115.0 |
| alpha/beta fold hydrolase | CKY39_RS14135 | Not Available | Positive | 3071433 - 3072185 | 26440.7 |
| rna methyltransferase | CKY39_RS14140 | Not Available | Negative | 3072178 - 3073221 | 38034.3 |
| hypothetical protein | CKY39_RS14145 | Not Available | Negative | 3073371 - 3076340 | 90839.2 |
| duf4259 domain-containing protein | CKY39_RS14150 | Not Available | Negative | 3076561 - 3076947 | 13483.3 |
| hypothetical protein | CKY39_RS14155 | Not Available | Positive | 3077278 - 3078279 | 36323.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
