Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS14015 | Not Available | Negative | 3046300 - 3046773 | 16651.7 |
| mfs transporter | CKY39_RS14020 | Not Available | Negative | 3046912 - 3048102 | 40403.1 |
| arac family transcriptional regulator | CKY39_RS14025 | Not Available | Positive | 3048212 - 3048991 | 27916.2 |
| trap transporter large permease | CKY39_RS14030 | Not Available | Negative | 3049028 - 3050320 | 45960.4 |
| trap transporter small permease | CKY39_RS14035 | Not Available | Negative | 3050331 - 3050843 | 19272.9 |
| trap transporter substrate-binding protein | CKY39_RS14040 | Not Available | Negative | 3050924 - 3051898 | 35514.8 |
| d-erythronate dehydrogenase | CKY39_RS14045 | Not Available | Negative | 3051954 - 3052970 | 35415.5 |
| hypothetical protein | CKY39_RS14050 | Not Available | Positive | 3053036 - 3054106 | 39234.8 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | CKY39_RS14055 | Not Available | Negative | 3054157 - 3055860 | 62162.3 |
| sdr family oxidoreductase | CKY39_RS14060 | Not Available | Positive | 3056001 - 3056783 | 27554.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
