Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)h-dependent flavin oxidoreductase | CKY39_RS13965 | Not Available | Positive | 3035832 - 3036872 | 35804.2 |
| alpha/beta hydrolase | CKY39_RS13970 | Not Available | Positive | 3036914 - 3037591 | 24215.3 |
| tetr/acrr family transcriptional regulator | CKY39_RS13975 | Not Available | Negative | 3037566 - 3038186 | 23313.1 |
| duf2855 family protein | CKY39_RS13980 | Not Available | Positive | 3038237 - 3039355 | 41012.4 |
| duf3014 domain-containing protein | CKY39_RS13985 | Not Available | Positive | 3039498 - 3040409 | 32883.6 |
| hypothetical protein | CKY39_RS13990 | Not Available | Positive | 3040518 - 3040766 | 9097.81 |
| aminomethyl-transferring glycine dehydrogenase | CKY39_RS13995 | Not Available | Negative | 3040798 - 3043707 | 104094.0 |
| glycine cleavage system protein gcvh | CKY39_RS14000 | Not Available | Negative | 3043765 - 3044136 | 12855.0 |
| glycine cleavage system aminomethyltransferase gcvt | CKY39_RS14005 | Not Available | Negative | 3044208 - 3045380 | 40873.5 |
| hypothetical protein | CKY39_RS14010 | Not Available | Negative | 3045667 - 3046203 | 19945.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
