Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipase d-like domain-containing protein | CKY39_RS13915 | Not Available | Negative | 3026834 - 3028438 | 58473.6 |
| hypothetical protein | CKY39_RS13920 | Not Available | Negative | 3028539 - 3028790 | 8984.87 |
| s8 family serine peptidase | CKY39_RS13925 | Not Available | Negative | 3028879 - 3030975 | 71900.6 |
| hypothetical protein | CKY39_RS13930 | Not Available | Positive | 3031083 - 3031352 | 9601.29 |
| hypothetical protein | CKY39_RS13935 | Not Available | Negative | 3031364 - 3031585 | 8198.73 |
| hemagglutinin | CKY39_RS13940 | Not Available | Positive | 3031695 - 3032012 | 11683.7 |
| hypothetical protein | CKY39_RS13945 | Not Available | Negative | 3032016 - 3032735 | 26082.8 |
| protein no vein domain-containing protein | CKY39_RS13950 | Not Available | Positive | 3032847 - 3033764 | 32674.8 |
| udp-n-acetylglucosamine 1-carboxyvinyltransferase | CKY39_RS13955 | Not Available | Positive | 3033921 - 3035222 | 47191.9 |
| hypothetical protein | CKY39_RS13960 | Not Available | Positive | 3035230 - 3035727 | 19021.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
