Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CKY39_RS00275 | Not Available | Positive | 57292 - 57645 | 11887.0 |
| class iv adenylate cyclase | CKY39_RS00280 | Not Available | Positive | 57946 - 58470 | 19249.1 |
| merr family transcriptional regulator | CKY39_RS00285 | Not Available | Negative | 58437 - 58814 | 13561.3 |
| hypothetical protein | CKY39_RS00290 | Not Available | Positive | 58910 - 59371 | 16967.9 |
| gdsl-type esterase/lipase family protein | CKY39_RS00295 | Not Available | Negative | 59349 - 59993 | 22121.5 |
| abc transporter substrate-binding protein | CKY39_RS00300 | Not Available | Positive | 60156 - 61343 | 42534.6 |
| abc transporter permease | CKY39_RS00305 | Not Available | Positive | 61344 - 63173 | 64081.8 |
| osmc family protein | CKY39_RS00310 | Not Available | Positive | 63191 - 63748 | 20038.0 |
| abc transporter atp-binding protein | CKY39_RS00315 | Not Available | Positive | 63732 - 64580 | 30460.9 |
| abc transporter atp-binding protein | CKY39_RS00320 | Not Available | Positive | 64577 - 65422 | 30116.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
