Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pard-like family protein | CKY39_RS13770 | Not Available | Negative | 2993442 - 2993702 | 9304.28 |
| duf6194 family protein | CKY39_RS13775 | Not Available | Negative | 2993770 - 2994174 | 14956.7 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS13780 | Not Available | Negative | 2994190 - 2995209 | 35023.0 |
| sensor histidine kinase | CKY39_RS13785 | Not Available | Negative | 2995233 - 2996648 | 50789.7 |
| response regulator | CKY39_RS13790 | Not Available | Negative | 2996649 - 2997314 | 24655.7 |
| bug family tripartite tricarboxylate transporter substrate binding protein | CKY39_RS13795 | Not Available | Negative | 2997341 - 2998384 | 37043.9 |
| autotransporter-associated beta strand repeat-containing protein | CKY39_RS34755 | Not Available | Positive | 2998624 - 3001758 | 100963.0 |
| autotransporter-associated beta strand repeat-containing protein | CKY39_RS13805 | Not Available | Positive | 3001713 - 3001967 | 8380.83 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | CKY39_RS34315 | Not Available | Positive | 3001964 - 3002514 | 17389.4 |
| autotransporter outer membrane beta-barrel domain-containing protein | CKY39_RS13815 | Not Available | Positive | 3003463 - 3005598 | 70460.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
