Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax boronicumulans |
| Strain | strain J1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | iron-rich wall sinter |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1140694 bp
Thymine Count
1142761 bp
Guanine Count
2427426 bp
Cytosine Count
2427017 bp
Genome Length
7137898 bp
Protein-coding Genes
6533 genes
Non-Coding Genes
212 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | CKY39_RS13725 | Not Available | Negative | 2983828 - 2984634 | 28705.0 |
| hypothetical protein | CKY39_RS13730 | Not Available | Negative | 2984631 - 2985182 | 20292.0 |
| lysr family transcriptional regulator | CKY39_RS13735 | Not Available | Positive | 2985351 - 2986259 | 33916.8 |
| 3-deoxy-7-phosphoheptulonate synthase | CKY39_RS13740 | Not Available | Positive | 2986475 - 2987599 | 40306.5 |
| spore coat u domain-containing protein | CKY39_RS13745 | Not Available | Positive | 2987999 - 2988523 | 17313.0 |
| molecular chaperone | CKY39_RS13750 | Not Available | Positive | 2988557 - 2989306 | 26089.6 |
| fimbria/pilus outer membrane usher protein | CKY39_RS34295 | Not Available | Positive | 2989332 - 2991056 | 60208.2 |
| fimbria/pilus outer membrane usher protein | CKY39_RS34750 | Not Available | Positive | 2991014 - 2991655 | 22224.6 |
| spore coat protein u domain-containing protein | CKY39_RS13760 | Not Available | Positive | 2991643 - 2992617 | 33396.9 |
| type i methionyl aminopeptidase | CKY39_RS13765 | Not Available | Negative | 2992651 - 2993442 | 28374.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
